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Extracellular histones as exosome membrane proteins regulated by cell stress
Umeå University, Faculty of Medicine, Department of Diagnostics and Intervention. Umeå University, Faculty of Medicine, Department of Surgical and Perioperative Sciences, Anaesthesiology.ORCID iD: 0000-0002-7246-1442
Umeå University, Faculty of Medicine, Department of Diagnostics and Intervention. Umeå University, Faculty of Medicine, Department of Surgical and Perioperative Sciences, Anaesthesiology.ORCID iD: 0000-0002-3586-4197
Umeå University, Faculty of Medicine, Department of Medical and Translational Biology.
Umeå University, Faculty of Medicine, Department of Medical and Translational Biology.
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2025 (English)In: Journal of Extracellular Vesicles, E-ISSN 2001-3078, Vol. 14, no 2, article id e70042Article in journal (Refereed) Published
Abstract [en]

Histones are conserved nuclear proteins that function as part of the nucleosome in the regulation of chromatin structure and gene expression. Interestingly, extracellular histones populate biofluids from healthy individuals, and when elevated, may contribute to various acute and chronic diseases. It is generally assumed that most extracellular histones exist as nucleosomes, as components of extracellular chromatin. We analysed cell culture models under normal and stressed conditions to identify pathways of histone secretion. We report that core and linker histones localize to extracellular vesicles (EVs) and are secreted via the multivesicular body/exosome pathway. Upregulation of EV histone secretion occurs in response to cellular stress, with enhanced vesicle secretion and a shift towards a population of smaller EVs. Most histones were membrane associated with the outer surface of EVs. Degradation of EV-DNA did not impact significantly on EV-histone association. Individual histones  and histone octamers bound strongly to liposomes and EVs, but nucleosomes did not, showing histones do not require DNA for EV binding. Histones colocalized to tetraspanin positive EVs but using genetic or pharmacological intervention, we found that all known pathways of exosome biogenesis acted positively on histone secretion. Inhibition of autophagy and lysosomal degradation had a strong positive effect on EV histone release. Unexpectedly, EV-associated histones lacked the extensive post-translational modification of their nuclear counterparts, suggesting loss of PTMs may be involved in their trafficking or secretion. Our data does not support a significant role for EV-histones existing as nucleosomes. We show for the first time that histones are secreted from cells as membrane proteins via EVs/exosomes. This fundamental discovery provides support for further investigation of the biological activity of exosome associated histones and their role in disease.

Place, publisher, year, edition, pages
John Wiley & Sons, 2025. Vol. 14, no 2, article id e70042
Keywords [en]
cellular stress, exosome, extracellular vesicles, histone, membrane associated proteins, posttranslational modification
National Category
Anesthesiology and Intensive Care
Identifiers
URN: urn:nbn:se:umu:diva-235899DOI: 10.1002/jev2.70042ISI: 001425807900001PubMedID: 39976275Scopus ID: 2-s2.0-85218945899OAI: oai:DiVA.org:umu-235899DiVA, id: diva2:1939974
Funder
Region VästerbottenThe Kempe FoundationsAvailable from: 2025-02-25 Created: 2025-02-25 Last updated: 2025-09-05Bibliographically approved
In thesis
1. Explorations of hypoxia and other stressors in clinical context and on the cellular response level
Open this publication in new window or tab >>Explorations of hypoxia and other stressors in clinical context and on the cellular response level
2025 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

Background

Systemic and local tissue hypoxia are contributors to both morbidity and mortality in critical illness and necessitate timely intensive care-based vital organ support. There is a need for better biomarkers to allow early intervention to support recovery for intensive care cases. The aim of this thesis was to first assess factors related to poor outcome in critical care patients with a focus on a regional cohort in the early phase of critical illness, and with a focus on circulatory and respiratory impairment. Then, the aim was to assess early responses to hypoxic and inflammatory stress on a cellular level in lab-based studies, with a focus on extracellular vesicles (EVs) released by cells as potential biomarkers.

Methods

In papers I and II, intensive care cases transported by fixed-wing air ambulance between 2000-2016 were screened for inclusion. A total of 2146 cases were included and all-cause mortality at 90 days post transport was assessed using regression models with relevant co-factors. In Paper III mammalian cells were cultured and EVs were isolated from the conditioned culture media and studied with regard to histone content using an array of molecular biological and biochemical methods including western blotting, immunocytochemistry, transmission electron microscopy and mass spectrometry. In the exploratory study Paper IV, plasma from intensive care cases and healthy volunteers was collected, from which EVs were isolated. Various isolation methods were used and compared, and the EVs were studied with focus on associated histones.

Results

Paper I and II: An increased all-cause mortality risk was found for impaired oxygenation and hemodynamic instability. In addition, the risk of non-daytime transporting of patients was associated with higher mortality risk, not explained by oxygenation or hemodynamic instability. Total transport mission time was assessed for all-cause mortality risk and clinical deterioration during transport. Total mission time was not associated with increased mortality risk. Small negative changes in oxygenation SpO2/FiO2 ratio and mean arterial pressure during transport were observed for the cohort.

Paper III: It was found that histones associated with the outer membrane surface of EVs, and EV secretion increased following cell stress. Histone secretion could be targeted pharmacologically and genetically by targeting intracellular signaling/trafficking pathways and by altering histone posttranslational modifications.

Paper IV: Established methods proved inadequate for reliable EV purification and histone quantification in plasma EV samples. This was likely due to an abundance of plasma proteins co-purifying with EVs, including immunoglobulins. The presence of histones in EVs was confirmed using liquid chromatography mass-spectrometry.

Conclusion

The fixed-wing air ambulance system in Northern Sweden is safe and comparable to other international transport systems, even though the stressors hypoxia and hemodynamic instability were found to contribute to significant all-cause mortality. Histones are associated with EVs and their degree of association can be affected by cell stress, including hypoxia and inflammatory stress. In plasma, improved methods are needed to quantify histone levels in EVs in order to assess their potential use as biomarkers.v

Place, publisher, year, edition, pages
Umeå: Umeå University, 2025. p. 85
Series
Umeå University medical dissertations, ISSN 0346-6612 ; 2373
Keywords
intensive care, critical care, hypoxia, shock, mortality, extracellular vesicles, inflammation, histones
National Category
Anesthesiology and Intensive Care
Identifiers
urn:nbn:se:umu:diva-243897 (URN)978-91-8070-743-5 (ISBN)978-91-8070-744-2 (ISBN)
Public defence
2025-10-02, Lecture hall Betula, Norrlands universitetssjukhus, Umeå, 13:00 (English)
Opponent
Supervisors
Available from: 2025-09-11 Created: 2025-09-05 Last updated: 2025-09-08Bibliographically approved

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Singh, BirendraFredriksson Sundbom, MarcusMuthukrishnan, UmaNatarajan, BalasubramanianSandblad, LindaHaney, MichaelGilthorpe, Jonathan D.
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