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Mass spectrometry data from a quantitative analysis of protein expression in gills of immuno-challenged blue mussels (Mytilus edulis)
Uppsala University, Disciplinary Domain of Science and Technology, Chemistry, Department of Chemistry - BMC, Analytical Chemistry. (Ramström)
Uppsala University, Disciplinary Domain of Science and Technology, Chemistry, Department of Chemistry - BMC, Analytical Chemistry. (Lind)
Uppsala University, Disciplinary Domain of Science and Technology, Chemistry, Department of Chemistry - BMC, Analytical Chemistry. (Bergquist)
The RoyalSwedishAcademyofSciences,SvenLovénCenterforMarineScience.
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2016 (English)In: Data in Brief, ISSN 1529-4188, E-ISSN 1683-1470, Vol. 8, 470-473 p.Article in journal (Refereed) Published
Abstract [en]

Here, we provide the dataset associated with our research article on the potential effects of ocean acidification on antimicrobial peptide (AMP) activity in the gills of Mytilus edulis, "Impact of ocean acidification on antimicrobial activity in gills of the blue mussel (Mytilus edulis)" [1]. Blue mussels were stimulated with lipopolysaccharides and samples were collected at different time points post injection. Protein extracts were prepared from the gills, digested using trypsin and a full in-depth proteome investigation was performed using liquid chromatography coupled to tandem mass spectrometry (LC-MS/MS). Protein identification and quantification was performed using the MaxQuant 1.5.1.2 software, "MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification" [2].

Place, publisher, year, edition, pages
Elsevier, 2016. Vol. 8, 470-473 p.
Keyword [en]
Mass spectrometry data; Blue mussels; Mytilus edulis; Gills; Quantitative proteomics
National Category
Analytical Chemistry
Research subject
Chemistry with specialization in Analytical Chemistry
Identifiers
URN: urn:nbn:se:uu:diva-301959DOI: 10.1016/j.dib.2016.05.073PubMedID: 27358907OAI: oai:DiVA.org:uu-301959DiVA: diva2:955774
Funder
Magnus Bergvall Foundation, 2015-01200Swedish Research Council, 621-2011-4423Carl Tryggers foundation , CST 15:57Åke Wiberg Foundation
Available from: 2016-08-26 Created: 2016-08-26 Last updated: 2016-08-26Bibliographically approved

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Hörnaeus, KatarinaMi, JiaBergquist, JonasLind, Sara
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