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Magnetic nanoparticles for diagnosis of inflammatory bowel disease
Uppsala University, Disciplinary Domain of Medicine and Pharmacy, Faculty of Pharmacy, Department of Pharmacy.ORCID iD: 0000-0002-0589-546X
2024 (English)Doctoral thesis, comprehensive summary (Other academic)
Abstract [en]

The identification of biomarkers overexpressed during inflammation is critical for targeting diagnostic or therapeutic agents to the inflamed intestine in inflammatory bowel disease (IBD). The first part of this thesis employs global proteomic analysis to identify preclinical IBD biomarkers using in vitro and in vivo models. The study focuses on apical plasma membrane biomarkers and secreted biomarkers, identifying promising targets for diagnostic imaging probes. Proteomic analysis quantified 7340 proteins across ileum, proximal, and distal colon samples in vivo, revealing significant protein concentration changes primarily in the colon after DSS treatment. Functional annotation linked these changes to inflammatory responses. In vitro analysis using Caco-2 cells treated with TNF-α identified 465 proteins involved in defense and cytokine responses, showing greater relevance for modeling inflammation than DSS-treated cells.

Key inflammatory biomarkers were identified, including TGM2, ICAM1, CEACAM1, and ANXA1, with varied upregulation across models. These biomarkers were validated via immunohistochemistry, showing consistent expression in inflamed and healthy tissues. Additionally, luminal and immune cell-associated proteins such as myeloperoxidase and calprotectin were identified, suggesting their potential for in situ quantitative assessment of IBD activity.

The second part of this thesis details the development of MRI-active biosensors using superparamagnetic iron oxide nanoparticles (SPIONs) functionalized via click chemistry with ligands targeting the identified biomarkers. The synthesis and characterization of SiO2-coated γ-Fe2O3 SPIONs and their subsequent functionalization with antibodies targeting ICAM1 were optimized for enhanced biocompatibility and targeting efficacy. In vitro studies demonstrated specific binding and internalization of bioconjugated SPIONs in inflamed Caco-2 cells.

The third part explores in vivo targeting efficacy of bioconjugated SPIONs in colitis-induced mice. Ceacam1-conjugated SPIONs showed significant binding to inflamed tissues, highlighting their potential for targeted imaging and therapeutic delivery in IBD. This thesis underscores the importance of systematic nanoparticle modification and characterization, advancing precision medicine and diagnostic technologies for IBD.

Place, publisher, year, edition, pages
Uppsala: Acta Universitatis Upsaliensis, 2024. , p. 68
Series
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Pharmacy, ISSN 1651-6192 ; 355
Keywords [en]
inflammatory bowel disease, proteomics, biomarkers, SPIONs, click chemistry, MRI biosensors, targeted therapy, diagnostic imaging
National Category
Pharmaceutical Sciences
Identifiers
URN: urn:nbn:se:uu:diva-532431ISBN: 978-91-513-2164-6 (print)OAI: oai:DiVA.org:uu-532431DiVA, id: diva2:1873158
Public defence
2024-09-06, room A1:111a, BMC, Husargatan 3, Uppsala, 13:15 (English)
Opponent
Supervisors
Available from: 2024-08-16 Created: 2024-06-19 Last updated: 2024-11-21
List of papers
1. Proteomics-Informed Identification of Luminal Targets For In Situ Diagnosis of Inflammatory Bowel Disease
Open this publication in new window or tab >>Proteomics-Informed Identification of Luminal Targets For In Situ Diagnosis of Inflammatory Bowel Disease
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2021 (English)In: Journal of Pharmaceutical Sciences, ISSN 0022-3549, E-ISSN 1520-6017, Vol. 110, no 1, p. 239-250Article in journal (Refereed) Published
Abstract [en]

Inflammatory bowel disease (IBD) is a chronic condition resulting in impaired intestinal homeostasis. Current practices for diagnosis of IBD are challenged by invasive, demanding procedures. We hypothesized that proteomics analysis could provide a powerful tool for identifying clinical biomarkers for non-invasive IBD diagnosis. Here, the global intestinal proteomes from commonly used in vitro and in vivo models of IBD were analyzed to identify apical and luminal proteins that can be targeted by orally delivered diagnostic agents. Global proteomics analysis revealed upregulated plasma membrane proteins in intestinal segments of proximal- and distal colon from dextran sulfate sodium-treated mice and also in inflamed human intestinal Caco-2 cells pretreated with pro-inflammatory agents. The upregulated colon proteins in mice were compared to the proteome of the healthy ileum, to ensure targeting of diagnostic agents to the inflamed colon. Promising target proteins for future investigations of non-invasive diagnosis of IBD were found in both systems and included Tgm2/TGM2, Icam1/ICAM1, Ceacam1/CEACAM1, and Anxa1/ANXA1. Ultimately, these findings will guide the selection of appropriate antibodies for surface functionalization of imaging agents aimed to target inflammatory biomarkers in situ.

Place, publisher, year, edition, pages
Elsevier, 2021
Keywords
Biomarker(s), Caco-2 cells, Colon, Gastrointestinal tract, Inflammatory bowel disease (IBD), In vitro model(s), Nanoparticle(s), Principal component analysis, Proteomic, Targeted drug delivery
National Category
Pharmaceutical Sciences
Identifiers
urn:nbn:se:uu:diva-431610 (URN)10.1016/j.xphs.2020.11.001 (DOI)000600571800024 ()33159915 (PubMedID)
Funder
Science for Life Laboratory - a national resource center for high-throughput molecular bioscienceSwedish Research Council, 5715Swedish Research Council, 1951Knut and Alice Wallenberg FoundationSwedish Research Council, 2552
Note

De två första författarna delar förstaförfattarskapet

Available from: 2021-01-15 Created: 2021-01-15 Last updated: 2024-08-09Bibliographically approved
2. Bioconjugated nanoparticles as targeted MRI contrast agents for diagnosis of ulcerative colitis
Open this publication in new window or tab >>Bioconjugated nanoparticles as targeted MRI contrast agents for diagnosis of ulcerative colitis
(English)Manuscript (preprint) (Other academic)
National Category
Basic Medicine
Research subject
Pharmaceutical Science
Identifiers
urn:nbn:se:uu:diva-532430 (URN)
Available from: 2024-06-19 Created: 2024-06-19 Last updated: 2024-08-09
3. Click chemistry-based bioconjugation of iron oxide nanoparticles
Open this publication in new window or tab >>Click chemistry-based bioconjugation of iron oxide nanoparticles
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2025 (English)In: Small, ISSN 1613-6810, E-ISSN 1613-6829, Vol. 11, article id 2407883Article in journal (Refereed) Published
Abstract [en]

Superparamagnetic iron oxide nanoparticles (SPIONs) exhibit unique properties for diverse biomedical applications, including drug delivery and diagnostic imaging. Actively targeted SPIONs enhance delivery to diseased sites, reducing side effects and enhancing treatment efficacy. However, development of reproducible functionalization protocols is challenged by the erratic behavior of nanoparticles in suspensions, such as agglomeration and sedimentation. In this study, we develop and systematically optimize a functionalization method to attach the Fc-region of antibodies onto silica coated SPIONs via click chemistry, ensuring controlled ligand orientation on the particle surface. The synthesis and successive modifications of silica coated SPIONs with organic moieties is presented resulting in the final click conjugation with anti-ICAM1 antibodies. These antibodies target ICAM1, upregulated on epithelial cell surfaces during gastrointestinal inflammation. Thermogravimetric analysis and infrared spectroscopy confirm successful SPION functionalization after each modification step. Cell viability assessment indicates no adverse effects of bioconjugated particles. Quantitative elemental analysis reveals significantly higher iron concentration in inflammation-induced Caco-2 cells exposed to ICAM1-modified particles compared to non-conjugated counterparts. Furthermore, laser scanning confocal microscopy of these cells suggests surface interaction and internalization of bioconjugated SPIONs, underscoring their potential for targeted imaging and therapy in inflammatory diseases.

Place, publisher, year, edition, pages
John Wiley & Sons, 2025
Keywords
inflammatory bowel disease, diagnostics, antibodies, targeting, gastrointestinal tract
National Category
Materials Chemistry Pharmaceutical Sciences
Research subject
Pharmaceutical Science
Identifiers
urn:nbn:se:uu:diva-532429 (URN)10.1002/smll.202407883 (DOI)001418971500001 ()39924809 (PubMedID)
Funder
EU, Horizon 2020, 101002582
Available from: 2024-06-19 Created: 2024-06-19 Last updated: 2025-05-21Bibliographically approved

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