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Visualization of Biomolecular Structures: State of the Art Revisited
Masaryk University, Czech Republic.
University of Stuttgart, Germany.
Linköping University, Department of Science and Technology, Media and Information Technology. Linköping University, Faculty of Science & Engineering.
ZIB, Germany.
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2017 (English)In: Computer graphics forum (Print), ISSN 0167-7055, E-ISSN 1467-8659, Vol. 36, no 8, p. 178-204Article in journal (Refereed) Published
Abstract [en]

Structural properties of molecules are of primary concern in many fields. This report provides a comprehensive overview on techniques that have been developed in the fields of molecular graphics and visualization with a focus on applications in structural biology. The field heavily relies on computerized geometric and visual representations of three-dimensional, complex, large and time-varying molecular structures. The report presents a taxonomy that demonstrates which areas of molecular visualization have already been extensively investigated and where the field is currently heading. It discusses visualizations for molecular structures, strategies for efficient display regarding image quality and frame rate, covers different aspects of level of detail and reviews visualizations illustrating the dynamic aspects of molecular simulation data. The survey concludes with an outlook on promising and important research topics to foster further success in the development of tools that help to reveal molecular secrets.

Place, publisher, year, edition, pages
WILEY , 2017. Vol. 36, no 8, p. 178-204
Keywords [en]
molecular visualization; taxonomy; bioinformatics visualization
National Category
Computer Sciences
Identifiers
URN: urn:nbn:se:liu:diva-143916DOI: 10.1111/cgf.13072ISI: 000417496200014OAI: oai:DiVA.org:liu-143916DiVA, id: diva2:1170024
Note

Funding Agencies|German Research Foundation (DFG) [SFB716]; Senate Department for Economics, Technology and Research in Berlin; Excellence Center at Linkoping and Lund in Information Technology (ELLIIT); French Agency for Research [ANR-11-MONU-003, ANR-11-LABX-0011]; Vienna Science and Technology Fund (WWTF) [VRG11-010]; OeAD ICM [CZ17/2015]; PhysioIllustration research project - Norwegian Research Council [218023]; [NF-CZ07-MOP-2-086-2014]

Available from: 2018-01-02 Created: 2018-01-02 Last updated: 2018-02-12

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