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Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea
Joint Genome Inst, Dept Energy, Walnut Creek, CA 94598 USA..
Joint Genome Inst, Dept Energy, Walnut Creek, CA 94598 USA..
Bigelow Lab Ocean Sci, East Boothbay, ME USA..
Joint Genome Inst, Dept Energy, Walnut Creek, CA 94598 USA..
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2017 (English)In: Nature Biotechnology, ISSN 1087-0156, E-ISSN 1546-1696, Vol. 35, no 8, p. 725-731Article in journal (Refereed) Published
Abstract [en]

We present two standards developed by the Genomic Standards Consortium (GSC) for reporting bacterial and archaeal genome sequences. Both are extensions of the Minimum Information about Any (x) Sequence (MIxS). The standards are the Minimum Information about a Single Amplified Genome (MISAG) and the Minimum Information about a Metagenome-Assembled Genome (MIMAG), including, but not limited to, assembly quality, and estimates of genome completeness and contamination. These standards can be used in combination with other GSC checklists, including the Minimum Information about a Genome Sequence (MIGS), Minimum Information about a Metagenomic Sequence (MIMS), and Minimum Information about a Marker Gene Sequence (MIMARKS). Community-wide adoption of MISAG and MIMAG will facilitate more robust comparative genomic analyses of bacterial and archaeal diversity.

Place, publisher, year, edition, pages
NATURE PUBLISHING GROUP , 2017. Vol. 35, no 8, p. 725-731
National Category
Biological Sciences
Identifiers
URN: urn:nbn:se:uu:diva-333718DOI: 10.1038/nbt.3893ISI: 000407125800013PubMedID: 28787424OAI: oai:DiVA.org:uu-333718DiVA, id: diva2:1157546
Funder
EU, European Research Council, 310039Swedish Foundation for Strategic Research , SSF-FFL5
Available from: 2017-11-16 Created: 2017-11-16 Last updated: 2017-11-16Bibliographically approved

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Ettema, Thijs J. G.
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