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Multiplex dispensation order generation for pyrosequencing
RISE, Swedish ICT, SICS, Computer Systems Laboratory.ORCID iD: 0000-0003-3079-8095
2004 (English)Conference paper, (Refereed)
Abstract [en]

This paper introduces the multiplex dispensation order generation problem, a real-life combinatorial problem that arises in the context of analyzing large numbers of short to medium length DNA sequences. The problem is modeled as a constraint optimization problem (COP). We present the COP, its constraint programming formulation, and a custom search procedure. We give some experimental data supporting our design decisions. One of the lessons learnt from this study is that the ease with which the relevant constraints are expressed can be a crucial factor in making design decisions in the COP model.

Place, publisher, year, edition, pages
2004, 1. , 15 p.
National Category
Computer and Information Science
Identifiers
URN: urn:nbn:se:ri:diva-22334OAI: oai:DiVA.org:ri-22334DiVA: diva2:1041879
Conference
CP'2004 Workshop on CSP Techniques with Immediate Application, 27 Sep 2004, Toronto, Canada
Available from: 2016-10-31 Created: 2016-10-31 Last updated: 2017-08-10Bibliographically approved

Open Access in DiVA

fulltext(170 kB)2 downloads
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File name FULLTEXT01.pdfFile size 170 kBChecksum SHA-512
ab6ed912fc8b112c441c29c80ac6ddf9192fcf5476a2a751e6fc6a2a74ee6673798347475d43d522e8d2a799754ed120e81a8a38e09452483257a9b1cbd143d0
Type fulltextMimetype application/pdf

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  • apa
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